PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Sme2.5_07193.1_g00003.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum
Family bZIP
Protein Properties Length: 221aa    MW: 25425.2 Da    PI: 8.346
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Sme2.5_07193.1_g00003.1genomeEGDView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_132.71.7e-10117169557
                              CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
                   bZIP_1   5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkeva 57 
                              ++ rr+ +NRe+ArrsR RK++ +e+L++ +  L+  N++L ++l  ++ +++
  Sme2.5_07193.1_g00003.1 117 RKRRRMVSNRESARRSRMRKQKHLENLRNLANRLKVGNRELTNRLRLISHQSQ 169
                              5779999***********************************99998887766 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003389.4E-9113177IPR004827Basic-leucine zipper domain
PROSITE profilePS502179.749115167IPR004827Basic-leucine zipper domain
Gene3DG3DSA:1.20.5.1701.7E-7117167No hitNo description
PfamPF001701.1E-7117169IPR004827Basic-leucine zipper domain
SuperFamilySSF579596.43E-9117167No hitNo description
CDDcd147026.16E-17118167No hitNo description
PROSITE patternPS000360120135IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
GO:0044212Molecular Functiontranscription regulatory region DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 221 aa     Download sequence    Send to blast
MLSTFPATTL SADGLFPNSF PAFDGGFTPW ECIEPAFLFP QEVEEEEPVV SPKDSPPPEP  60
VILNSDSGSD DSKPNTVHSS SGSDDPNRNN DNNNKSNRCP DEKKRQRTTS NRDIDERKRR  120
RMVSNRESAR RSRMRKQKHL ENLRNLANRL KVGNRELTNR LRLISHQSQV VSCENDRLRT  180
ESAILRQTLE DIRQILIARQ IEQQMNSYTA WACNNIEQRP H
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1102120KKRQRTTSNRDIDERKRRR
2116120RKRRR
3116137RKRRRMVSNRESARRSRMRKQK
4129136RRSRMRKQ
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_016560923.11e-119PREDICTED: light-inducible protein CPRF2-like
TrEMBLM1BXK21e-119M1BXK2_SOLTU; Uncharacterized protein
STRINGPGSC0003DMT4000552141e-118(Solanum tuberosum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA28202251
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G22850.26e-30basic leucine-zipper 6